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Simulation Files for Zebrafish Spinal Circuit for Swimming Model

Description: Simulation files for zebrafish spinal circuit for swimming model.

Many spinal circuits dedicated to locomotor control have been identified in the developing zebrafish. We have built models of developing zebrafish spinal circuits coupled to simplified musculoskeletal models that reproduce coiling and swimming movements (beat and glide movement, double coiling and single coiling). We simulated intact spinal circuits as well as circuits with silenced neurons or altered synaptic transmission. The output of the simulations is found in this dataset.

Models were built and simulated using the Python programming language. The code for the models can be found at .

These models and the simulations are described in Roussel et al. (2021). . The data used to generate the figures are found in this dataset.
Authors: Bui, Tuan; University of Ottawa; ORCID iD 0000-0003-0024-1544
Keywords: Simulation
spina cord
Field of Research: 
Biological sciences
Neurosciences, biological and chemical aspects
Publication Date: 2021-08-31
Publisher: Federated Research Data Repository / dépôt fédéré de données de recherche
Funder: Natural Sciences and Engineering Research Council of Canada (NSERC); Neural Control of Swimming in Zebrafish; RGPIN-2015–06403
Related Identifiers: 
This dataset is a supplement to

Geographic Coverage: 
Province /
Province / Territory

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Access to this dataset is subject to the following terms:
Creative Commons Attribution 4.0 International (CC BY 4.0)
Bui, T. (2021). Simulation Files for Zebrafish Spinal Circuit for Swimming Model. Federated Research Data Repository.